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High-throughput sequencing reveals endophytic bacterial differentiation of common truffles (Tuber spp.) in China: diversity, biogeographical patterns, and fungal health implications.

Man Guo, Zhilan Xia, Xunyang He, Shanping Wan

Microbiology spectrum · 2026 · DOI 10.1128/spectrum.01866-25

The application of Rhizobium subbaraonis TY15 increased soybean growth and disease resistance by modifying rhizosphere microbial communities

Minqing Huang, Muhammad Afzal, Qihua Liang, Yihang Chen

Microbiology spectrum · 2026 · DOI 10.1128/spectrum.01155-25

Durable protection against lethal Rift Valley fever hepatitis and encephalitis following low-dose ΔNSsΔNSm vaccination in mice.

Karina Mueller Brown, Angel M Kindsvogel, Lingqing Xu, Ashley M Divens

mSphere · 2026 · DOI 10.1128/msphere.00894-25

Metagenomic libraries data sets from the hypersaline benthic microbial mats of the Fraternidad Lagoon, Puerto Rico, using an indirect DNA extraction method.

Rene Nieves-Morales, Christian J Quiles-Pérez, Edwin Omar Rivera-Lopez, Irimar Torres-Zapata

Microbiology resource announcements · 2026 · DOI 10.1128/mra.01504-25

Complete genome sequences of three Bradyrhizobium strains isolated from root nodules of peanut (Arachis hypogaea) cultivar Tainan Select No. 9 collected in Taiwan.

Shen-Chian Pei, Ya-Yuan Hsu, Sook-Kuan Lee, Chih-Yun Chen

Microbiology resource announcements · 2026 · DOI 10.1128/mra.01413-25

Complete genome sequences of two Mesoterricola strains belonging to the phylum Acidobacteriota, isolated from sediment and paddy soil.

Reika Isoda, Miyu Kuniyasu, Hideomi Itoh

Microbiology resource announcements · 2026 · DOI 10.1128/mra.01397-25

Genome sequences of nicotine-degrading Pseudomonas and Stutzerimonas strains isolated from nicotine-enriched activated sludge.

N Myers, T Navaratna, B Kim, K S Myers

Microbiology resource announcements · 2026 · DOI 10.1128/mra.01355-25

Burkholderia pseudomallei hybrid assemblies of 20 environmental isolates from Vietnam.

Sarah Weigl, Johanna Dabernig-Heinz, Trung Thanh Trinh, Ivo Steinmetz

Microbiology resource announcements · 2026 · DOI 10.1128/mra.00988-25

Nitrous oxide produced by denitrifying pseudomonads inhibits the growth of rhizosphere bacteria by inactivating the cobalamin-dependent methionine synthase.

Philip A Wasson, Darcy L McRose

mBio · 2026 · DOI 10.1128/mbio.02699-25

Interplay between SpaO variants shapes the architecture of the Salmonella type III secretion sorting platform.

José Eduardo Soto, Tingting Wang, Jorge E Galán, Maria Lara-Tejero

mBio · 2026 · DOI 10.1128/mbio.00155-26

The ORF6 accessory protein contributes to SARS-CoV-2 virulence and pathogenicity in the naturally susceptible feline model of infection.

Mohammed Nooruzzaman, Salman L Butt, Ruchi Rani, Chengjin Ye

Journal of virology · 2026 · DOI 10.1128/jvi.00644-25

Comparison of culture and culture-free methods for comprehensive identification of mycobacteria: a single-center prospective study.

Kazuki Hashimoto, Kiyoharu Fukushima, Yuki Matsumoto, Haruko Saito

Journal of clinical microbiology · 2026 · DOI 10.1128/jcm.01128-25

Genus-specific remodeling of carbon and energy metabolism facilitates acetoclastic methanogenesis in Methanosarcina spp. and Methanothrix spp.

Blake E Downing, Dinesh Gupta, Katie E Shalvarjian, Dipti D Nayak

Journal of bacteriology · 2026 · DOI 10.1128/jb.00448-25

Role of Tad pili during the transition from planktonic to biofilm state in Bradyrhizobium diazoefficiens USDA 110.

J Iglesias, D Colla, J S Serrangeli, M J Lozano

Journal of bacteriology · 2026 · DOI 10.1128/jb.00008-25

Streptococcus sanguinis antagonizes Prevotella melaninogenica in the context of the cystic fibrosis respiratory microbiome.

Bassam El Hafi, Fabrice Jean-Pierre, Lily Taub, Thomas H Hampton

Journal of bacteriology · 2026 · DOI 10.1128/jb.00005-26

The Borreliella burgdorferi BosR-associated small non-coding RNA BasA regulates virulence.

Brittany L Shapiro, Prashant Jaiswal, Lisa J Funkhouser-Jones, Sourav Roy

Infection and immunity · 2026 · DOI 10.1128/iai.00026-26

Acquisition of bedaquiline and clofazimine resistance in association with a novel loss-of-function mutation in the pepQ gene during treatment of multidrug-resistant tuberculosis.

Melissa Richard-Greenblatt, Ruchika Bagga, Carla Duncan, Maxime J Billick

ASM case reports · 2026 · DOI 10.1128/asmcr.00126-25

A synthetic microbial community for soybean biofertilization designed via chlorophyll-based iterative selection.

Damián Brignoli, Delfina Colla, Emilia Frickel-Critto, Cecilia B Castells

Applied and environmental microbiology · 2026 · DOI 10.1128/aem.02548-25

Nano-selenium mitigates antibiotic resistance in paddy ecosystems via microbiome remodeling and environmental filtering shifts.

Xiaorong Zhang, Qiaobing Luo, Zongqiang Gong, Huimin Yang

Applied and environmental microbiology · 2026 · DOI 10.1128/aem.02231-25

A distinct 2,2'-diphenic acid-mediated pyrene degradation pathway in a novel PAH degrader, Glutamicibacter soli ENR6.

Pengrui Zhang, Haiyang Zhang, Xinyu Yang, Yuanli Wu

Applied and environmental microbiology · 2026 · DOI 10.1128/aem.02064-25